Information for 6-TGTACCATTTVTG (Motif 9)

C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
Reverse Opposite:
G A T C C G T A A G T C C G T A G T C A G T C A A C G T A C T G C T A G A G C T C G T A A T G C G T C A
p-value:1e-9
log p-value:-2.074e+01
Information Content per bp:1.845
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 26.6bp
Average Position of motif in Background68.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTACCATTTVTG
AATGTATCAAT----
 A C G T A C G T C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTACCATTTVTG-
----CCATATATGG
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G A C G T
A C G T A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

HOXA5/MA0158.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGTACCATTTVTG
-----AATTAGTG
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGTACCATTTVTG
---ANCGTTTANN
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PB0078.1_Srf_1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTACCATTTVTG---
--TNCCATATATGGNA
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTACCATTTVTG
TTATGTACTAATAA--
 A C G T A C G T A C G T C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTACCATTTVTG
---ACCATATGTT
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGTACCATTTVTG
GATGGGGTATCATTTTT-
 A C G T A C G T A C G T A C G T A C G T C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTACCATTTVTG
--AACCTTATAT-
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G
A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGTACCATTTVTG----
--TTCTATTTTTAGNNN
 C A G T A T C G A C G T T C G A A G T C A G T C C G T A C A G T A C G T A C G T T A C G C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T