Information for 10-CGTCAKCACGCAS (Motif 9)

A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
Reverse Opposite:
A T C G A C G T T C A G G T A C A C T G A G C T T C A G T G C A A G C T A T C G C G T A A G T C A C T G
p-value:1e-19
log p-value:-4.486e+01
Information Content per bp:1.719
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.2 +/- 21.3bp
Average Position of motif in Background38.3 +/- 47.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf3/MA0605.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAKCACGCAS
ACGTCATC------
 A C G T A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAKCACGCAS
TACGTCAT-------
 A C G T A C G T A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAKCACGCAS
ACGTCA--------
 A C G T A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGTCAKCACGCAS
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGTCAKCACGCAS
------CACGCA-
 A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGTCAKCACGCAS
-----GCACGTNC
 A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGTCAKCACGCAS
----BGCACGTA-
 A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGTCAKCACGCAS--
-----GCACGTACCC
 A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Crem/MA0609.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAKCACGCAS
TTACGTCATN------
 A C G T A C G T A C G T A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGTCAKCACGCAS
TGACGTCA--------
 A C G T A C G T A C G T A G T C A C T G A C G T T A G C T C G A A C G T A G T C C T G A A G T C A C T G A G T C G T C A T A G C
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T