Information for 4-AYACTGGAGAAAA (Motif 3)

C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
Reverse Opposite:
G A C T A C G T A G C T A C G T A G T C G A C T A G T C A G T C C G T A A C T G A C G T C T G A A C G T
p-value:1e-86
log p-value:-1.987e+02
Information Content per bp:1.835
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif12.04%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.2 +/- 35.5bp
Average Position of motif in Background44.0 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AYACTGGAGAAAA
----TGGGGA---
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AYACTGGAGAAAA--
-TACTGGAAAAAAAA
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A A C G T A C G T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AYACTGGAGAAAA
NNTNNACAATGGGANNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AYACTGGAGAAAA
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AYACTGGAGAAAA
WDNCTGGGCA---
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AYACTGGAGAAAA
---CSTGGGAAAD
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AYACTGGAGAAAA
AACAAAGG------
 A C G T C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AYACTGGAGAAAA
ATTCTCGCGAGA-
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AYACTGGAGAAAA-------
NNCCTGNAAAAAAAAAAAAA
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AYACTGGAGAAAA
--AATGGAAAAT-
 C G T A A G C T C G T A A G T C G A C T A C T G A C T G C T G A A C T G C G T A C T G A C G T A C T G A
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T