Information for 12-AWCATCGAATATRCAC (Motif 15)

C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T C T A G A G C T C G T A A C G T C G T A A C G T A C G T G T A C A C T G C G T A A C G T A T C G C G A T A C G T
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.794
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 23.5bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC
------GHATATKCAT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC
--CATTAATTATTCAT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C
A C G T A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC
CTCATTAATTATGCAT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC
------GAATATTCAT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

POU4F2/MA0683.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC
CTCATTAATTATGCAT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AWCATCGAATATRCAC----
---ATGGGATATATCCGCCT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AWCATCGAATATRCAC--
--------ATATGCAAAT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC-----
----TNNATTATGCATANNTT
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AWCATCGAATATRCAC---
----ATGAATATTCATGAG
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:AWCATCGAATATRCAC-----
--------ATATGCAAATNNN
 C G T A C G T A A T G C G T C A C G A T A G T C C A T G G T C A C G T A C G A T C G T A A C G T C T G A A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A