Information for 2-AGCTGRGTATCCA (Motif 4)

C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C T G A A C G T G T C A A G T C G A T C A G T C C G T A A T C G A G T C A C G T
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.817
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.3 +/- 23.7bp
Average Position of motif in Background42.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCTGRGTATCCA--
NNNVCTGWGYAAACASN
 A C G T A C G T C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCTGRGTATCCA
-NCTAAGTAAACA
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCTGRGTATCCA----
--CAAAGTAAACANNNN
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCTGRGTATCCA--
---TATGTAAACANG
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCTGRGTATCCA---
-NCWRWGTAAACANSV
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGCTGRGTATCCA
-----DGTAAACA
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGCTGRGTATCCA-
------GTAAACAT
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T

FOXO3/MA0157.2/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGCTGRGTATCCA-
------GTAAACAA
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGCTGRGTATCCA---
----NDGTAAACARRN
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCTGRGTATCCA-----
---NNNGTAACTANGNNA
 C G T A C T A G A T G C C G A T A C T G C T A G A C T G A C G T C G T A A G C T G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A