Information for 1-GCCACAYGGCTTTCCC (Motif 3)

C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G A C T G T C G A C T G A G C T A A C T G T G A C A T G C C T A G A G C T A C T G C G A T A C T G C T A G A G T C
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.690
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.3 +/- 31.2bp
Average Position of motif in Background49.8 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCACAYGGCTTTCCC
GGTCACATGAC------
 A C G T C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCACAYGGCTTTCCC
GCCACGTG--------
 C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCACAYGGCTTTCCC
GTCACATGAY------
 C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCACAYGGCTTTCCC
NNCCACGTGG-------
 A C G T C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCACAYGGCTTTCCC
AAGCACATGG-------
 A C G T C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCACAYGGCTTTCCC
GTCACGTGGM------
 C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCACAYGGCTTTCCC
GGTCACGTGGC------
 A C G T C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCACAYGGCTTTCCC
NNCCACGTGG-------
 A C G T C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCACAYGGCTTTCCC
GCCACGTGT-------
 C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCACAYGGCTTTCCC
GTGCCACGCGACTG----
 A C G T A C G T C T A G A G T C A G T C C G T A G T A C T C G A A G C T A T C G A C T G T A G C C A G T A G C T A C G T A G T C G T A C A G T C
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T A C G T