Information for 4-TGGGTGTGCATGCATG (Motif 13)

A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
Reverse Opposite:
A G T C C T G A A G C T C T A G A G T C C T G A A C G T A C T G A G T C C G T A A G T C C T G A A G T C G T A C G T A C C T G A
p-value:1e-4
log p-value:-9.455e+00
Information Content per bp:1.815
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 8.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGGTGTGCATGCATG-
TACATGTGCACATAAAA
 A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGTGCATGCATG
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTGTGCATGCATG
TNNATTATGCATANNTT
 A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTGTGCATGCATG
NNGTATGTGCACATNNN
 A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGTGTGCATGCATG
TTCATTTGCATAT---
 A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGGTGTGCATGCATG
-GHATATKCAT-----
 A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGTGCATGCATG
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGGTGTGCATGCATG
GGGCCGTGTGCAAAAA--
 A C G T A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTGTGCATGCATG
TNTAATTTGCATACNA-
 A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTGTGCATGCATG
TNTAATTTGCATACNA-
 A C G T A G C T A C T G A C T G A C T G A G C T C T A G A C G T C T A G A G T C C G T A A G C T C T A G A G T C C T G A A G C T C T A G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T