Information for 5-CCAGCTCGGGCCA (Motif 11)

A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C T A G C A G T C A C T G C G T A A C T G G T A C A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.222e+01
Information Content per bp:1.937
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 28.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTCGGGCCA
GGTCANYTGAGGWCA
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGCTCGGGCCA
---GCTCGGSCTC
 A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAGCTCGGGCCA
-TGGCACGTGCCA
 A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTCGGGCCA---
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAGCTCGGGCCA
--GGCACGTGCC-
 A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

HES5/MA0821.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCAGCTCGGGCCA
-CGGCACGTGCCA
 A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCAGCTCGGGCCA-
--CNGTCACGCCAC
 A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCAGCTCGGGCCA--
------CGTGCCAAG
 A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTCGGGCCA
ACATGCCCGGGCAT
 A C G T A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTCGGGCCA
NAACAGCTGG-----
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C G T A G T C C T A G A C T G A C T G A G T C A G T C C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T