Information for 1-WRATGAAGMAYGM (Motif 1)

C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
Reverse Opposite:
A C T G A G T C T C A G A C G T A C T G A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets24.7 +/- 15.5bp
Average Position of motif in Background45.9 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:WRATGAAGMAYGM
---NGAAGC----
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WRATGAAGMAYGM
GGATGATGCAATA
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WRATGAAGMAYGM
-GATGAGTCATN-
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WRATGAAGMAYGM
GAAATGACTCA---
 A C G T C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:WRATGAAGMAYGM----
--ATGCATWATGCATRW
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WRATGAAGMAYGM-
GAATGACGAATAAC
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WRATGAAGMAYGM-
--ATGATKGATGRC
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:WRATGAAGMAYGM
-GATGACGT----
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:WRATGAAGMAYGM
--ATGACTCAT--
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WRATGAAGMAYGM
-DATGASTCATNN
 C G T A C T A G C G T A C G A T A C T G C G T A C G T A A C T G T G A C C G T A A G C T A C T G G T A C
A C G T C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C