Information for 2-TKSARGRWMAGKATRC (Motif 8)

A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C G T G T A C A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C G T A T C G G T A C C G T A
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 23.4bp
Average Position of motif in Background34.8 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TKSARGRWMAGKATRC
AAGTTCAAGGTCAGC----
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TKSARGRWMAGKATRC
BTCAAGGTCA------
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TKSARGRWMAGKATRC
TTCAAGGTCAT-----
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TKSARGRWMAGKATRC--
--AANNATCCGGATGTNN
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C A C G T A C G T
A C G T A C G T T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TKSARGRWMAGKATRC
-TCAAGGTCAN-----
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TKSARGRWMAGKATRC
--CAAGGHCANV----
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TKSARGRWMAGKATRC
NTCAAGGTCA------
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TKSARGRWMAGKATRC
------ANCAGGATGT
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TKSARGRWMAGKATRC
-TCAAGGTCAT-----
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TKSARGRWMAGKATRC
---CAGGTAAGTAT--
 A C G T A C T G A T G C C G T A T C A G A C T G C T A G C G A T G T A C C G T A A C T G A C T G C G T A A C G T C T G A A G T C
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T