Information for 3-CCTCGAGGGTGAT (Motif 6)

A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T
Reverse Opposite:
T C G A A C G T A T G C G C T A A G T C G A T C G T A C G C A T A T G C T C A G C G T A C A T G T A C G
p-value:1e-15
log p-value:-3.567e+01
Information Content per bp:1.482
Number of Target Sequences with motif285.0
Percentage of Target Sequences with motif32.87%
Number of Background Sequences with motif9678.7
Percentage of Background Sequences with motif21.01%
Average Position of motif in Targets48.0 +/- 24.7bp
Average Position of motif in Background50.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCTCGAGGGTGAT
----NNNANTGA-
 A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTCGAGGGTGAT--
---CGTGGGTGGTCC
 A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLIS3/MA0737.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCGAGGGTGAT-
CTTCGTGGGGGGTC
 A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCGAGGGTGAT-
CTTCGCGGGGGGTC
 A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

GLIS1/MA0735.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGAGGGTGAT--
GCTTCGTGGGGGGTCT
 A C G T A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGAGGGTGAT------
GCCASCAGGGGGCGCYVNNG
 A C G T A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCTCGAGGGTGAT
---GGAGGGGGAA
 A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTCGAGGGTGAT
WTGSCCTSAGGS----
 A C G T A C G T A C G T A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCTCGAGGGTGAT
------TGGGGA-
 A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTCGAGGGTGAT
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T A T G C G T A C G C A T A G T C T A C G C G T A C A T G C T A G T C A G C G A T T A C G T G C A A G C T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T