Information for 12-TTTCAGTAACAAH (Motif 22)

A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C
Reverse Opposite:
C A T G A C G T A C G T A T C G A C G T A C G T C G T A A G T C C G A T A C T G C G T A C T G A C T G A
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.3 +/- 22.3bp
Average Position of motif in Background50.8 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:TTTCAGTAACAAH
------NAACAAT
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:TTTCAGTAACAAH
-------AACAAT
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TTTCAGTAACAAH--
-----RNAACAATGG
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTTCAGTAACAAH
----GTAAACAAT
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTTCAGTAACAAH-----
---NNNTAACAATTATAN
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTCAGTAACAAH-----
--TTAAGAACAATAAATT
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTCAGTAACAAH---
-AAAAATAACAAACGG
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTCAGTAACAAH--
AACAAACAACAAGAG
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTCAGTAACAAH---------
AATAAAGAACAATAGAATTTCA
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTCAGTAACAAH------
--TNNAGAACAATANATNN
 A G C T A G C T A C G T A G T C C G T A C T A G C G A T C G T A C G T A A T G C C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C