Information for 5-CAATGCCAGTGGT (Motif 11)

A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
Reverse Opposite:
C G T A G T A C A G T C G T C A A G T C C G A T A C T G A C T G A G T C C G T A A C G T A G C T A C T G
p-value:1e-12
log p-value:-2.819e+01
Information Content per bp:1.847
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.2 +/- 16.7bp
Average Position of motif in Background66.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAATGCCAGTGGT
AACAATGGTAGTGTT
 A C G T A C G T A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAATGCCAGTGGT--
NNNNTGCCAGTGATTG
 A C G T A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAATGCCAGTGGT
GAACAATTGCAGTGTT
 A C G T A C G T A C G T A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAATGCCAGTGGT
AACAATTTCAGTGTT
 A C G T A C G T A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

Sox1/MA0870.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAATGCCAGTGGT
AACAATGNTATTGTT
 A C G T A C G T A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAATGCCAGTGGT
--ATGCCAACC--
 A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAATGCCAGTGGT
-CGTGCCAAG---
 A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAATGCCAGTGGT
---TGCCAA----
 A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAATGCCAGTGGT
--ATGCCCACC--
 A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAATGCCAGTGGT
NTCAAGGTCA-----
 A C G T A C G T A G T C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A C G T C T A G A C T G C G A T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T