Information for 13-RAYTSWTGTCAAG (Motif 15)

T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G A T A T G C C T G A C T G A C G A T A G C T
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.775
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.3 +/- 23.0bp
Average Position of motif in Background60.9 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:RAYTSWTGTCAAG
----CCTGTCAA-
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:RAYTSWTGTCAAG
----GCTGTCAA-
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:RAYTSWTGTCAAG
-----NTGTCAN-
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:RAYTSWTGTCAAG
----RHTGWCAR-
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:forward strand
Alignment:RAYTSWTGTCAAG-
------AGTCACGC
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RAYTSWTGTCAAG
---AAAAGTCAA-
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:RAYTSWTGTCAAG----
-----AGGTCAAGGTCA
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:RAYTSWTGTCAAG-
------TGTCANYT
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:RAYTSWTGTCAAG---
-----AAGGCAAGTGT
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:RAYTSWTGTCAAG----
-------NTCAAGGTCA
 T C G A C G T A A G C T A G C T A T C G G C T A C G A T T C A G C G A T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A