Information for 4-CAGGGGCAGTGMGSCC (Motif 8)

T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
Reverse Opposite:
A C T G A C T G T A G C A T G C A C G T A T G C C T G A A G T C A G C T A C T G G A T C A G T C G T A C A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.775
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.8 +/- 24.1bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC
GTAGGTCACTGGGTCA
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC
--AGGTCANTGACCTN
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC-
--AGGTCACCCTGACCT
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC
-NAGGTCACNNTGACC
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGCAGTGMGSCC
CCAGGAACAG-------
 A C G T T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGCAGTGMGSCC
AGAAAGTGAAAGTGA----
 A C G T A C G T A C G T T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC
-AGAGGAAGTG-----
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC----
NGAGGTCANNGAGTTCANNN
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGGGGCAGTGMGSCC
CAAGGHCANV------
 T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGGCAGTGMGSCC
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T T G A C C G T A A C T G A C T G A C T G C T A G A G T C C T G A C T A G A G C T A T C G T G C A A T C G A T C G A G T C G T A C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T