Information for 6-AACCACAAAG (Motif 4)

C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
Reverse Opposite:
A G T C G C A T G A C T A C G T A T C G A G C T A C T G A C T G A C G T C G A T
p-value:1e-16
log p-value:-3.864e+01
Information Content per bp:1.842
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.4 +/- 25.3bp
Average Position of motif in Background43.9 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AACCACAAAG
AAACCACANN-
 A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAAAG
AAACCACAGAN
 A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AACCACAAAG
AAACCGCAAA-
 A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AACCACAAAG
NWAACCACADNN
 A C G T A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AACCACAAAG
NAAACCACAG--
 A C G T A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAAAG
AAACCACAGC-
 A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-AACCACAAAG
AAACCGCAA--
 A C G T C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AACCACAAAG
----ACAAAG
 C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACCACAAAG-
-VRRACAAWGG
 C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AACCACAAAG------
----ACAAAGGNBCCT
 C G T A T G C A A G T C G T A C T C G A A T G C C G T A C T G A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T