Information for 23-GAGGTTGCTGTGT (Motif 33)

A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A C G T A A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.362e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 19.3bp
Average Position of motif in Background42.0 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGGTTGCTGTGT--
NCCGTTGCTANGNGN
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGGTTGCTGTGT--
NNCGTTGCTATGGNN
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGGTTGCTGTGT
-AGGVNCCTTTGT
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGGTTGCTGTGT
-CTGTTGCTAGGS
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GAGGTTGCTGTGT
------GCTGTG-
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAGGTTGCTGTGT------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAGGTTGCTGTGT---
----HTGCTGAGTCAT
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGGTTGCTGTGT----
-----TGCTGAGTCATC
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C

MAF::NFE2/MA0501.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGGTTGCTGTGT---
-AAANTGCTGAGTCAT
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C G T A G C T A G A C T G A C T T A C G G T A C G C A T C A T G G C T A T A C G A C G T G T A C C G T A A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGGTTGCTGTGT----
--KGTTGCTAGGMAACA
 A C T G C G T A A C T G A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A