Information for 16-TGTGTCACTATGGGGC (Motif 31)

A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C A G T C A G T C C G T A A G C T C G T A A C T G A G C T A T C G C G T A A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.141e+01
Information Content per bp:1.903
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 22.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTGTCACTATGGGGC
-CTGTTGCTAGGS---
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTCACTATGGGGC---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTGTCACTATGGGGC
NNNGTAACTANGNNA-
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGTCACTATGGGGC
NNCGTTGCTATGGNN-
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGTGTCACTATGGGGC-
-GGGTTACTANAGGTCA
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C A C G T
A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGTCACTATGGGGC
NCCGTTGCTANGNGN-
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGTGTCACTATGGGGC
TGAGTCA---------
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGTGTCACTATGGGGC-
---GTTGCCATGGNAAC
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTCACTATGGGGC
NATGAGTCACC-------
 A C G T A C G T A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGTGTCACTATGGGGC
-GGGGCCCAAGGGGG-
 A C G T C T A G A C G T A C T G A C G T A T G C T C G A A G T C A C G T C T G A A C G T A C T G A C T G C T A G A C T G A T G C
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T