Information for 12-TCACCACTCCGAGGTC (Motif 22)

A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A A G T C A G T C G A C T A G T C A C T G A C T G G C T A A C T G A C G T A C T G A C T G A C G T A C T G G T C A
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.897
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.8 +/- 15.7bp
Average Position of motif in Background30.7 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCACCACTCCGAGGTC
-MRSCACTYAA-----
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCACCACTCCGAGGTC-
TGGACCAATCAGCACTCT
 A C G T A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC--
--------CAAAGGTCAG
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCACCACTCCGAGGTC
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC-
---------AGRGGTCA
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC
-ATCCAC---------
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.50
Offset:9
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC-
---------TRAGGTCA
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC
-AGCCACTCAAG----
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC-----
--------CAAAGGTCAAGGG
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TCACCACTCCGAGGTC
-AASCACTCAA-----
 A C G T A G T C G T C A A G T C G T A C C G T A A G T C C A G T A G T C G T A C A C T G C G T A A C T G A C T G A C G T A G T C
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T