Information for 14-CCCCAACCGGGTG (Motif 19)

A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G
Reverse Opposite:
T A G C G T C A A T G C T A G C A T G C C A T G A T C G A C G T A C G T A C T G C A T G T A C G T A C G
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.410
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 25.2bp
Average Position of motif in Background36.1 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCCCAACCGGGTG--
NCCCCCCCGGGGGGN
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCCCAACCGGGTG--
-CCCCCCCGGGGGNN
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCCCAACCGGGTG--
ACCCCCCCGGGGGGN
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCCCAACCGGGTG
CCCCCCCC-----
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCCAACCGGGTG
-CACAGCAGGGGG
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCCAACCGGGTG--
DCHCAGCAGGRGGCC
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCCAACCGGGTG
-TACATCCGGGT-
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCCAACCGGGTG--
-CACAGCGGGGGGTC
 A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCCCAACCGGGTG
CTATCCCCGCCCTATT-
 A C G T A C G T A C G T A C G T A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCCAACCGGGTG
GCCCCGCCCC----
 A C G T A T G C A T G C G T A C T G A C T G C A T G C A T A G C G T A C T A C G A T C G T A C G C A G T A T C G
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T