Information for 8-CCCCATGATGAGA (Motif 15)

A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A G T C G T C A A C G T A G T C C T G A C A G T A C T G A C T G C T A G A C T G
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.919
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 29.2bp
Average Position of motif in Background66.0 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCCATGATGAGA
CCCCCTGCTGTG-
 A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCCATGATGAGA
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCCATGATGAGA----
AAACATAATGAGGTTGC
 A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCCATGATGAGA
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCCATGATGAGA
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

GLIS1/MA0735.1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCCATGATGAGA
AGACCCCCCACGAAGC--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCCATGATGAGA
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCCATGATGAGA
GACCCCCCACGAAG---
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCCATGATGAGA
---CCTGCTGAGH
 A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCCATGATGAGA--
TCNCCTGCTGNGNNN
 A G T C A G T C A G T C A G T C G C T A A G C T A C T G C G T A A C G T A C T G C G T A A C T G C T G A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G