Information for 8-ATTAAAGTCTTTT (Motif 5)

C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A C T G A A C T G C T G A A G T C A C G T A C G T A C G T C G T A C G T A A C G T
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.880
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.8 +/- 7.7bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTAAAGTCTTTT
ATTAAA-------
 C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAAGTCTTTT
NTAATTAATAT-----
 A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTAAAGTCTTTT
ACTAATTAAA-------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTAAAGTCTTTT
NGCAATTAAA-------
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTAAAGTCTTTT
NATTCAAAT-----
 A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATTAAAGTCTTTT
CTAATTAA--------
 A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTAAAGTCTTTT
GCAATAAAAA------
 A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTAAAGTCTTTT
GTAATTAA--------
 A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATTAAAGTCTTTT
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ATTAAAGTCTTTT
AGAGCCATAAAATTCG---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T G T C A C G T A C G T A C T A G A G C T A G T C A G C T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T A C G T A C G T