Information for 8-CTTTTTAAAA (Motif 14)

A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A
Reverse Opposite:
G A C T C G A T A C G T A G C T C G T A C G T A C G T A C T G A C T G A T C A G
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.637
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif312.6
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets60.0 +/- 26.4bp
Average Position of motif in Background48.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTAAAA---
NNNTTTNTAATACNG
 A C G T A C G T A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTTTTTAAAA----
CTACCAATAAAATTCT
 A C G T A C G T A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTAAAA
NGCAATTAAA-
 A C G T A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAAAA--
--TTTGAAACCG
 A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTTTTAAAA
NCYAATAAAA
 A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTTTTTAAAA
-NATTCAAAT
 A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTTTTAAAA-
NTAATTAATAT
 A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTTTTAAAA
CCYMATAAAA
 A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTAAAA--
TCTTTANTAATANN
 A C G T A C G T A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTTTTTAAAA
---ATTAAA-
 A G T C G A C T G A C T G C A T G C A T G C A T T C G A C G T A G C T A C T G A
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T