Information for 6-GAGGGAGCCCTAA (Motif 2)

A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
Reverse Opposite:
A G C T A C G T C T G A A C T G C T A G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 22.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA
--CGGAGC-----
 A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGGGAGCCCTAA
--GGGAGGACNG-
 A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA
GGGCGGGAAGG----
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAGCCCTAA
GGGCGGGACC-----
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGAGCCCTAA---
NNNNTGAGCACTGTNNG
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGCCCTAA
GGCGGGAARN----
 A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGGGAGCCCTAA
GRTGMTRGAGCC----
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GAGGGAGCCCTAA------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGGGAGCCCTAA
----CAGCC----
 A C T G C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C G T A C A G C T T G C A C T G A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T