Information for 12-TTGTTGTAATAAC (Motif 11)

A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T C T G A C G A T A C G T G T C A A G T C C G T A C G T A A T G C C G T A C G T A
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 24.5bp
Average Position of motif in Background66.8 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGTAATAAC
GTNTTGTTGTGANNT-
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTGTAATAAC-
NNNTTTNTAATACNG
 A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTGTTGTAATAAC
TAATTGTTCTAAAC--
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTGTTGTAATAAC
TTCAATTGTTCTAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTGTAATAAC
NNTTTTGTTTTGATNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTTGTAATAAC
GNNATTTGTCGTAANN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGTTGTAATAAC---
TATTGGTAATTACCTT
 A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

Hoxd3/MA0912.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGTTGTAATAAC---
TTGAGTTAATTAACCT
 A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGTTGTAATAAC---
TTGAGTTAATTAACCT
 A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGTAATAAC
NATGTTGCAA----
 A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C G T C G T A C G T A A G C T C G T A C G T A G T A C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T