Information for 7-AGMSCAGACCAGCTGA (Motif 9)

G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A
Reverse Opposite:
A C G T A G T C G T C A A T C G A G T C C G A T A C T G C T A G A C G T A G T C A G C T A C T G A T G C C A G T A G T C A C G T
p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.726
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.1 +/- 21.4bp
Average Position of motif in Background53.7 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA--
--------HCAGCTGDTN
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA
---CCAGACRSVB---
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA
---BCAGACWA-----
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA--
--------CCAGCTGTTN
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGMSCAGACCAGCTGA-
-----NNVVCAGCTGBN
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA
------CAGCAGCTGN
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA
------NAACAGCTGT
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AGMSCAGACCAGCTGA--
--------VCAGCTGBNN
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

TFAP4/MA0691.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AGMSCAGACCAGCTGA-
-------AACAGCTGAT
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGMSCAGACCAGCTGA
---CCAGACAG-----
 G T C A A C T G G T C A A T C G A G T C C T G A A C T G G T C A A G T C A G T C G C T A C T A G A T G C A C G T A C T G T G C A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T