Information for 12-GTTGAGTGTG (Motif 39)

A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A A T G C
p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.969
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.8 +/- 27.3bp
Average Position of motif in Background43.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTTGAGTGTG-
CTTGAGTGGCT
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTGAGTGTG
BTBRAGTGSN
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTTGAGTGTG-
-TTGAGTGSTT
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTGAGTGTG
CTYRAGTGSY
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GTTGAGTGTG-
-TTRAGTGSYK
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTTGAGTGTG--
--TGGGTGTGGC
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTTGAGTGTG---
-NTGGGTGTGGCC
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTTGAGTGTG---
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTGAGTGTG---
--TGGGTGTGGCN
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTGAGTGTG
-TTGATTGN-
 A T C G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T