Information for 10-AGCGAGGACA (Motif 33)

C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A
Reverse Opposite:
A C G T T C A G A C G T A G T C A G T C G C A T T G A C A C T G A T G C G C A T
p-value:1e-7
log p-value:-1.753e+01
Information Content per bp:1.807
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif57.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets39.5 +/- 19.7bp
Average Position of motif in Background50.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGCGAGGACA
--TRAGGTCA
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGCGAGGACA--
--CAAGGHCANV
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCGAGGACA-
-CCAGGAACAG
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCGAGGACA-
---AAGGTCAC
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCGAGGACA-
-TCAAGGTCAN
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCGAGGACA
BTCAAGGTCA
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCGAGGACA
ATCAAGGTCA
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGCGAGGACA
GGTCANYTGAGGWCA
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCGAGGACA-
-GGGAGGACNG
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCGAGGACA
--AGRGGTCA
 C G T A A T C G A G T C A C T G C G T A C T A G C T A G T G C A A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A