Information for 9-AGAARCACCTCCG (Motif 17)

C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
Reverse Opposite:
T G A C C T A G A C T G G T C A C T A G A T C G C G A T A C T G A G T C A C G T A C G T A T G C A C G T
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.783
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif85.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets50.8 +/- 26.6bp
Average Position of motif in Background48.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAARCACCTCCG
-AAATCACTGC--
 C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAARCACCTCCG-
NNGGCGACACCTCNNN
 A C G T A C G T C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAARCACCTCCG
ADGGYAGYAGCATCT---
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAARCACCTCCG
NGAAGC-------
 C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAARCACCTCCG
AGGAAACAGCTG--
 A C G T C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAARCACCTCCG
-AAATCACAGCA-
 C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAARCACCTCCG
AAATAAACA------
 A C G T A C G T C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGAARCACCTCCG
WWATRTAAACAN-----
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAARCACCTCCG
GTAAACA------
 C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAARCACCTCCG
--AAGCACTTAA-
 C G T A A T C G C G T A C G T A C T A G A G T C C G T A A T G C A G T C A C G T A G T C G A T C A C T G
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T