Information for 9-AGATATTRAAAGTMAT (Motif 12)

C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G G T C A A G T C G A C T C A G T G A C T A G T C C G T A C G T A G A C T G T C A A G C T A G T C G C A T
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.711
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 27.3bp
Average Position of motif in Background37.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AGATATTRAAAGTMAT
-----TTCAAGGTCAT
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGATATTRAAAGTMAT----
AGATSTNDNNDSAGATAASN
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGATATTRAAAGTMAT
-CGGTTTCAAA-----
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGATATTRAAAGTMAT-
------TCAAGGTCATA
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGATATTRAAAGTMAT----
---TATTCAAGGTCATGCGA
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGATATTRAAAGTMAT
CTAATATTGCTAAA---
 A C G T C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGATATTRAAAGTMAT
CTAATATTGCTAAA---
 A C G T C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGATATTRAAAGTMAT
---NATTCAAAT----
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:AGATATTRAAAGTMAT-
-----------GTCATN
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGATATTRAAAGTMAT
GGAAANTGAAACTNA-
 C G T A C T A G T C G A A C G T C G T A A C G T A C G T T C A G C G T A G T C A C G T A T A C G C A G T T G A C C G T A A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T