Information for 5-GGMGGTGCAGTCC (Motif 5)

C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
Reverse Opposite:
C T A G C T A G T G C A A T G C A C G T A T C G T A G C G T C A A T G C A G T C C A T G A G T C A G T C
p-value:1e-14
log p-value:-3.435e+01
Information Content per bp:1.671
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif86.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets57.6 +/- 22.6bp
Average Position of motif in Background50.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGMGGTGCAGTCC
AGGGGGCGGGGCTG---
 A C G T A C G T A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGMGGTGCAGTCC
AAGGKGRCGCAGGCA
 A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGMGGTGCAGTCC
GGGGGCGGGGCC----
 A C G T A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGMGGTGCAGTCC
GGGGGCGGGGC-----
 A C G T A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGMGGTGCAGTCC
RGKGGGCGGAGC-----
 A C G T A C G T A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGMGGTGCAGTCC
GGGGNGGGGC-----
 A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGMGGTGCAGTCC----
NNNANTGCAGTGCNNTT
 C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GGMGGTGCAGTCC
GGGNGGGGGCGGGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGMGGTGCAGTCC
GGGAATTGTAGT--
 A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGMGGTGCAGTCC
TGGGTGGGGC-----
 A C G T A C G T C T A G T C A G G T A C T C A G T A C G C A G T A C T G A T G C T G C A A T C G A C G T A G T C G A T C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T