Information for 4-GTCAGGGTGA (Motif 3)

C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A
Reverse Opposite:
C G A T A G T C G C T A G T A C T A G C G T A C G C A T A C T G C G T A A G T C
p-value:1e-17
log p-value:-3.940e+01
Information Content per bp:1.731
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif594.4
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets52.0 +/- 25.4bp
Average Position of motif in Background49.6 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGGGTGA----
GGTCANNGTGACCTN
 A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A A C G T A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGGGTGA----
CAGGTCACCGTGACCTT
 A C G T A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTGA---
AGGTCACCCTGACCT
 A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGGGTGA
NTGTCAN-----
 A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTCAGGGTGA------
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTCAGGGTGA
GTCATN----
 C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGGGTGA-----
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGGTGA
AGTCACGC---
 A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTGA
AGGTCAAGGTCA
 A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTGA
AGGTCAAGGTCA
 A C G T A C G T C T A G C G A T A G T C C G T A C A T G A T C G C A T G C G A T A C T G G C T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A