Information for 3-TGTTTGCAMA (Motif 2)

C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A
Reverse Opposite:
C G A T C A T G C A G T A C T G T G A C G T C A G T C A C T G A G A T C G C T A
p-value:1e-24
log p-value:-5.642e+01
Information Content per bp:1.729
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.29%
Number of Background Sequences with motif673.0
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets49.3 +/- 28.1bp
Average Position of motif in Background50.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCAMA-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TGTTTGCAMA-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGTTTGCAMA
TRTTTACTTW
 C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TGTTTGCAMA
CNTGTTTACATA
 A C G T A C G T C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCAMA
TGTTTACTTT
 C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCAMA
TGTTTACTTT
 C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGCAMA--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGTTTGCAMA--
TGTTTACTTAGG
 C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCAMA
TGTTTAC---
 C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGTTTGCAMA-
-ATTTGCATAT
 C G A T C T A G A G C T A C G T A C G T A C T G G T A C G T C A G T A C C G T A A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T