Information for 14-CTGGGACATRGGC (Motif 19)

A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C
Reverse Opposite:
A T C G A T G C A G T C A G T C C G T A C G A T A C T G A C G T A G T C A G T C G A T C T G C A A C T G
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.754
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif66.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets63.2 +/- 29.3bp
Average Position of motif in Background52.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGACATRGGC--
NNAGGGACAAGGGCNC
 A C G T A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGGGACATRGGC--
GTAGGGCAAAGGTCA
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGGGACATRGGC
CCAGGAACAG----
 A C G T A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGGACATRGGC
--GGAACAAAGR-
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGGGACATRGGC-
--AGGTCAAGGTCA
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGGGACATRGGC--
-TGGGGCAAAGGTCA
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGGACATRGGC--
-TAGGGCAAAGGTCA
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGGGACATRGGC-
--AGGTCAAGGTCA
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGGGACATRGGC
NGNTCTAGAACCNGV--
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGGGACATRGGC
--AAAACAAAGG-
 A G T C A C G T C T A G A C T G T C A G G T C A G T A C C G T A C G A T C T A G A C T G A T C G A T G C
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T