Information for 4-WGCTMSCACTCMCYTM (Motif 15)

C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
Reverse Opposite:
A C T G C G T A C T A G A C T G A C G T A C T G C G T A A T C G A C G T A C T G A T C G A C T G C G T A A T C G A T G C C G A T
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 25.3bp
Average Position of motif in Background77.7 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGCTMSCACTCMCYTM
-NCTGTCAATCAN---
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:WGCTMSCACTCMCYTM
-GCTCGGSCTC-----
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGCTMSCACTCMCYTM
-SCTGTCAVTCAV---
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-WGCTMSCACTCMCYTM
NNAGTCCCACTCNNNN-
 A C G T C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:WGCTMSCACTCMCYTM
--CRCCCACGCA----
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WGCTMSCACTCMCYTM
GSCTGTCACTCA----
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:WGCTMSCACTCMCYTM
---MRSCACTYAA---
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:WGCTMSCACTCMCYTM
----GCCACGCCCCC-
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T A C G T A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:WGCTMSCACTCMCYTM
---AASCACTCAA---
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:WGCTMSCACTCMCYTM
-----NNACTTACCTN
 C G T A A T C G A T G C A C G T G T A C A T G C A G T C C G T A A T G C A C G T A G T C G T C A A G T C G A T C A C G T T G A C
A C G T A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G