Information for 11-AGAACACTCT (Motif 12)

C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T
Reverse Opposite:
C G T A A C T G T G C A T A C G A G C T C T A G A C G T C G A T G A T C C G A T
p-value:1e-11
log p-value:-2.690e+01
Information Content per bp:1.832
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif86.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.4 +/- 22.9bp
Average Position of motif in Background52.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAACACTCT----
AAGAACATWHTGTTC
 A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAACACTCT----
VAGRACAKWCTGTYC
 A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAACACTCT----
VAGRACAKNCTGTBC
 A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------AGAACACTCT
TATCATTAGAACGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTCT---
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAACACTCT-----
NAGAACAGNCTGTNCT
 A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTCT
CCAGGAACAG---
 A C G T A C G T A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAACACTCT
-NAACAAT--
 C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGAACACTCT-
TTCTAGAABNTTCTA
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGAACACTCT---
AGCGGCACACACGCAA
 A C G T A C G T A C G T C G T A C A T G C G T A C G T A A G T C C T G A A T G C A C G T T G A C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A