Information for 11-GTTAATCTCCATACAC (Motif 9)

T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
Reverse Opposite:
A C T G A G C T A C T G G A C T C G T A C G A T A C T G A T C G G C T A A T C G C T G A A G C T C G A T C G T A G T C A A T G C
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.699
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.1 +/- 30.6bp
Average Position of motif in Background42.7 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0144.1_Pou2f2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
TNTAATTTGCATANNN
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
TNTAATTTGCATACNA
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
TNTAATTTGCATACNA
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
--TAATTTGCATAA--
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
--AAATTAGCATAAT-
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
--TAATTTGCATAA--
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC---
----ATTTGCATACAATGG
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
----ATTTGCATA---
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
----ATTTGCATA---
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTAATCTCCATACAC
-BTVATTWGCATA---
 T A C G A C G T G A C T C G T A T C G A A G C T T A G C C G A T A T G C G T A C C G T A G C A T C G T A G T A C C T G A T A G C
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T