Information for 23-TTTTGGCTTG (Motif 34)

A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G
Reverse Opposite:
A G T C C G T A C T G A A T C G G T A C T G A C C G T A C G T A C T G A G T C A
p-value:1e-1
log p-value:-4.337e+00
Information Content per bp:1.725
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif768.1
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets55.0 +/- 25.4bp
Average Position of motif in Background50.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTTTGGCTTG
--TTGGCA--
 A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTTGGCTTG
-NTTGGCANN
 A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGGCTTG--
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTTGGCTTG---
---TGTCTAGACG
 A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGGCTTG-
TGATTGGCTANN
 A C G T A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGGCTTG
TTTTATGGCTN-
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGGCTTG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTTGGCTTG
CCTTTGTTTT-
 A C G T A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTTTGGCTTG---
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G A C G T A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

E2F7/MA0758.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCTTG----
TTTTGGCGGGAAAA
 A C G T A G C T C G A T A C G T A C T G A C T G A T G C A G C T C G A T A C T G A C G T A C G T A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A