Information for 18-SGGCGGTTAACCC (Motif 23)

A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C
Reverse Opposite:
A T C G A C T G A C T G A C G T A C G T G T C A C T G A A G T C G T A C A T C G A G T C A T G C T A C G
p-value:1e-9
log p-value:-2.207e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 29.0bp
Average Position of motif in Background49.0 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-SGGCGGTTAACCC---
NNNNCTGTTAACNNTNN
 A C G T A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

MYBL1/MA0776.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SGGCGGTTAACCC-
--ACCGTTAACGGT
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T
A C G T A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:SGGCGGTTAACCC----
CCTTAGTTAACTAAAAT
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SGGCGGTTAACCC------
---AGGCTAATCCCCAANG
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SGGCGGTTAACCC
-----GCTAATCC
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:SGGCGGTTAACCC----
-GNNAGCTAATCCCCCN
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T A C G T A C G T A C G T
A C G T A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

MYBL2/MA0777.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SGGCGGTTAACCC---
-AACCGTTAAACGGTC
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T A C G T A C G T
A C G T C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SGGCGGTTAACCC
AAGGTGTKAA---
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SGGCGGTTAACCC--
-----NYTAATCCYB
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:SGGCGGTTAACCC-
-----CTTAATCCC
 A T G C A T C G C T A G A T G C A C T G A C T G A G C T A C G T C G T A C G T A G T A C A G T C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C