Information for 16-AGRCAWGGTTARA (Motif 19)

C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
Reverse Opposite:
A C G T G A C T G A C T C T G A C G T A G T A C A T G C C G A T A C G T A C T G G A C T A G T C A C G T
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.791
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets29.4 +/- 27.2bp
Average Position of motif in Background54.7 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGRCAWGGTTARA
AAGGCAAGTGT---
 A C G T C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGRCAWGGTTARA---
TATTCAAGGTCATGCGA
 A C G T C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGRCAWGGTTARA
--TCAAGGTCATA
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGRCAWGGTTARA
-BTCAAGGTCA--
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGRCAWGGTTARA
--TCAAGGTCAT-
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGRCAWGGTTARA
AAGATAAGATAACA
 A C G T C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGRCAWGGTTARA
---CAAGGHCANV
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGRCAWGGTTARA
--TCAAGGTCAN-
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGRCAWGGTTARA
-NTCAAGGTCA--
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGRCAWGGTTARA
-TTCAAGGTCAT-
 C G T A A C T G C T G A A G T C G T C A C G T A A T C G A C T G A C G T A G C T C G T A C T G A C G T A
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T