Information for 16-AATGTTATCAAARRGC (Motif 16)

T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
Reverse Opposite:
T A C G A G T C G A T C A G T C G A C T A G C T C G A T A T C G C G T A A G C T C T G A C T G A T A G C G T C A A C G T A C G T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.652
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif120.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.4 +/- 29.3bp
Average Position of motif in Background49.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATGTTATCAAARRGC
AAAATGTAAACAAACAG-
 A C G T A C G T T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATGTTATCAAARRGC
AAAATGTAAACAAACAG-
 A C G T A C G T T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATGTTATCAAARRGC
AATATTAATAAAGA--
 T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATGTTATCAAARRGC
TAAATGTAAACAAAGGT-
 A C G T A C G T T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AATGTTATCAAARRGC--
-AGAAGAACAAAGGACTA
 T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATGTTATCAAARRGC
TGATTGTTAACAGTTGG-
 A C G T A C G T T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AATGTTATCAAARRGC
------ATTAAA----
 T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATGTTATCAAARRGC
AAAAATAACAAACGG-
 T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AATGTTATCAAARRGC
------RACAAWGG--
 T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AATGTTATCAAARRGC--
-NANAGATCAAAGGGNNN
 T G C A G T C A C A G T A T C G G A C T G A C T C T G A C G A T A T G C C G T A C T G A C T G A C T A G C T A G A C T G A T G C A C G T A C G T
A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T