Information for 11-CCTGTGGCCATGG (Motif 13)

A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
Reverse Opposite:
G A T C A G T C G T C A A C G T A C T G A C T G A G T C A G T C G T C A A G T C C G T A A C T G A C T G
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 24.7bp
Average Position of motif in Background78.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGCCATGG
SCCTSAGGSCAW--
 A C G T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGGCCATGG
GCCTCAGGGCAT--
 A C G T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCTGTGGCCATGG
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTGTGGCCATGG---
--NGTTGCCATGGCAA
 A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G A C G T A C G T A C G T
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCTGTGGCCATGG
ATTGCCTGAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTGTGGCCATGG
-CTGTTGCTAGGS
 A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCTGTGGCCATGG----
---GTTGCCATGGNAAC
 A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTGTGGCCATGG----
-CGGTTGCCATGGCAAC
 A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T
A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTGTGGCCATGG---
--GGTTGCCATGGCAA
 A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G A C G T A C G T A C G T
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTGTGGCCATGG
ATTGCCTGAGGCGAA--
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C A T G
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T