Information for 14-AAATTACAATCCTCTC (Motif 12)

G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C
Reverse Opposite:
A C T G C T G A C A T G C G T A C A T G A C T G C G T A A C G T A C G T A T C G G C A T C T G A G T C A C G A T A G C T C A G T
p-value:1e-11
log p-value:-2.643e+01
Information Content per bp:1.681
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.8 +/- 23.0bp
Average Position of motif in Background53.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAATTACAATCCTCTC
NAGATWNBNATCTNN--
 A C G T G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AAATTACAATCCTCTC---
--------AGCCACTCAAG
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AAATTACAATCCTCTC-
NNTTTTCACACCTTNNN
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AAATTACAATCCTCTC--
--------AASCACTCAA
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AAATTACAATCCTCTC
-----CTAATCCTCTT
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C
A C G T A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AAATTACAATCCTCTC
TATAATTATAATATTC--
 A C G T A C G T G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AAATTACAATCCTCTC
AAATTAGCATAAT---
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:AAATTACAATCCTCTC---
---------NSCACTYVAV
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:forward strand
Alignment:AAATTACAATCCTCTC--
-TACGAGACTCCTCTAAC
 G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AAATTACAATCCTCTC
GCTAATTATAATTATC--
 A C G T A C G T G T C A T C G A G C T A A C G T A G C T C G T A T A G C G T C A G T C A C G A T A G T C G T A C C G A T G A T C A G C T G T A C
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T A C G T