Information for 9-CAGATGGACT (Motif 9)

G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
Reverse Opposite:
C G T A T A C G C A G T T G A C G A T C C T G A A C G T T A G C C A G T C T A G
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.677
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif15.14%
Number of Background Sequences with motif3510.8
Percentage of Background Sequences with motif7.45%
Average Position of motif in Targets55.0 +/- 23.8bp
Average Position of motif in Background50.3 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGACT
AACAGATGGC--
 A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGACT
AACAGATGGT--
 A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGACT
AACAKATGGY--
 A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGGACT--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAGATGGACT
NAACAGCTGG---
 A C G T A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGACT
AACAGATGGTCN
 A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CAGATGGACT
VNAVCAGCTGGC--
 A C G T A C G T A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CAGATGGACT
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAGATGGACT
NAHCAGCTGD---
 A C G T A C G T A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGATGGACT
CCAGACRSVB-
 A C G T G A T C G T C A A C T G G T C A G A C T C T A G A C T G G C T A A T G C G C A T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T