Information for 6-AGGGAAGTCTGTGAGA (Motif 5)

T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
Reverse Opposite:
C A G T A G T C A G C T G T A C G C T A A G T C C G T A A T C G C T G A A G T C C G A T A C G T A G T C A G T C A G T C A C G T
p-value:1e-14
log p-value:-3.300e+01
Information Content per bp:1.764
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 29.3bp
Average Position of motif in Background54.8 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGGAAGTCTGTGAGA
--VBSYGTCTGG----
 T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGGAAGTCTGTGAGA
----TWGTCTGV----
 T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGGGAAGTCTGTGAGA
-------GCTGTG---
 T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGGGAAGTCTGTGAGA
-GGNGCGNCTGTTNNN
 T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGGGAAGTCTGTGAGA
----CTGTCTGG----
 T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGTCTGTGAGA
ANCAGGAAGT--------
 A C G T A C G T T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGTCTGTGAGA
AAGGCAAGTGT------
 A C G T T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGTCTGTGAGA
ACVAGGAAGT--------
 A C G T A C G T T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGGGAAGTCTGTGAGA
AVCAGGAAGT--------
 A C G T A C G T T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGGGAAGTCTGTGAGA
ACAGGAAGTG-------
 A C G T T G C A T C A G A C T G C T A G G T C A C G T A A C T G A G C T A T G C A C G T A C T G C G A T A C T G C T G A T C A G G T C A
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T