p-value: | 1e-6 |
log p-value: | -1.435e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.42% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 69.3 +/- 11.1bp |
Average Position of motif in Background | 66.9 +/- 6.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATTCAAAGTACCCCA--- --TTCNAAGTACTTNNNNN |
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LIN54/MA0619.1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CATTCAAAGTACCCCA NATTCAAAT------- |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CATTCAAAGTACCCCA--- --TTTTAAGTACTTAAATT |
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PB0156.1_Plagl1_2/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATTCAAAGTACCCCA---- ---NNNNGGTACCCCCCANN |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CATTCAAAGTACCCCA--- --TACTAAGTACTTAAATG |
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PB0028.1_Hbp1_1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CATTCAAAGTACCCCA NNCATTCATTCATNNN------ |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATTCAAAGTACCCCA CGGTTTCAAA-------- |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATTCAAAGTACCCCA ACATTCATGACACG--- |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CATTCAAAGTACCCCA GACCACATTCATACAAT---- |
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PB0094.1_Zfp128_1/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATTCAAAGTACCCCA---- ---TTNGGGTACGCCNNANN |
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