Information for 23-AGTTAATCTTTAT (Motif 30)

C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T
Reverse Opposite:
C G T A A C G T C T G A C T G A C G T A A C T G C G T A A C G T A C G T C G T A C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 30.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGTTAATCTTTAT-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGTTAATCTTTAT--
NGTTAATNATTAACN
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTTAATCTTTAT
GGTTAAACATTAA
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTTAATCTTTAT
-GTTAATNATTAA
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1B/MA0153.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGTTAATCTTTAT-
-GTTAATGATTAAC
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGTTAATCTTTAT
-NYTAATCCYB--
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAATCTTTAT-
NANANTTAATCCCNNNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGTTAATCTTTAT
--TTAATCCT---
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTTAATCTTTAT--
ATAGTTAATCCCCCNNA
 A C G T A C G T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGTTAATCTTTAT
--YTAATCCY---
 C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G C T A G C T C G T A G A C T
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T