Information for 7-ATGTGGTTTC (Motif 3)

T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
Reverse Opposite:
C A T G G C T A C G T A G T C A G T A C G A T C C G T A T A G C C G T A A C G T
p-value:1e-22
log p-value:-5.227e+01
Information Content per bp:1.834
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.14%
Number of Background Sequences with motif265.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets40.1 +/- 28.2bp
Average Position of motif in Background48.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
NNTGTGGTTT-
 A C G T T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
CTGTGGTTTN
 T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC
GCTGTGGTTT-
 A C G T T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGTTTC
GTCTGTGGTTT-
 A C G T A C G T T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGTTTC
NNHTGTGGTTWN
 A C G T A C G T T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
TTTGCGGTTT-
 A C G T T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:ATGTGGTTTC---
---TGGTTTCAGT
 T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
TTGCGGTTT-
 T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATGTGGTTTC--
-TGTGGATTNNN
 T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATGTGGTTTC------
-TNTGGTTTCGATACN
 T G C A C G A T A T C G A C G T C T A G A C T G A C G T A C G T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G