Information for 20-CAGAGACTATATT (Motif 27)

A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T C G T A A G C T C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 19.6bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGACTATATT-----
NDBAGATRWTATCTVNNNNN
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGACTATATT
GCAGTGATTT----
 A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAGAGACTATATT---
------CTATTTTTGG
 A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------CAGAGACTATATT
NNNNTGCCAGTGATTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAGAGACTATATT
-BCAGACWA----
 A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.48
Offset:-10
Orientation:forward strand
Alignment:----------CAGAGACTATATT
GAGCCTGGTACTGWGCCTGR---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGACTATATT
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------CAGAGACTATATT
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGACTATATT
ATGCCAGACN-------
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGACTATATT
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T C A A G T C A C G T C T G A A C G T G T C A A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T