Information for 19-ATTTTATCGA (Motif 31)

C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C G T
p-value:1e-6
log p-value:-1.430e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 16.8bp
Average Position of motif in Background63.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTATCGA---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTATCGA---
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:3
Score:0.72
Offset:-8
Orientation:forward strand
Alignment:--------ATTTTATCGA----
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTATCGA---
NGANTTTTATGGCTCN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATTTTATCGA
NTTTTATTGG
 C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTATCGA---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATTTTATCGA
NTTTTATTGG
 C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTTTATCGA
-TCTTATCT-
 C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTTTATCGA-
-TTTTATTRGN
 C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ATTTTATCGA---
---TTATCGATTA
 C G T A A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A